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Table 3 The over-represented classification of GO annotations for human identified genes

From: A comparative genome analysis of gene expression reveals different regulatory mechanisms between mouse and human embryo pre-implantation development

 

GO

p value

1 v 2

(4)

GO:0051301~cell division

1.92E-03

 

GO:0044237~cellular metabolic process

3.40E-03

 

GO:0006396~RNA processing

6.67E-03

 

GO:0022402~cell cycle process

8.89E-03

2 v 4

(4)

GO:0044238~primary metabolic process

1.67E-03

 

GO:0044237~cellular metabolic process

2.92E-03

 

GO:0016265~death

5.13E-03

 

GO:0006396~RNA processing

8.17E-03

4 v 8

(23)

GO:0043170~macromolecule metabolic process

2.72E-45

 

GO:0044238~primary metabolic process

1.47E-38

 

GO:0044237~cellular metabolic process

2.95E-34

 

GO:0006396~RNA processing

7.68E-27

 

GO:0016043~cellular component organization and biogenesis

1.00E-25

 

GO:0019222~regulation of metabolic process

2.41E-18

 

GO:0050794~regulation of cellular process

3.30E-18

 

GO:0010468~regulation of gene expression

1.21E-17

 

GO:0006350~transcription

2.63E-17

 

GO:0007049~cell cycle

7.90E-16

 

GO:0051301~cell division

4.09E-15

 

GO:0033036~macromolecule localization

6.39E-14

 

GO:0050789~regulation of biological process

1.18E-12

 

GO:0045184~establishment of protein localization

1.36E-11

 

GO:0051236~establishment of RNA localization

5.45E-11

 

GO:0022402~cell cycle process

5.56E-10

 

GO:0051649~establishment of cellular localization

1.10E-07

 

GO:0007059~chromosome segregation

2.18E-07

 

GO:0051641~cellular localization

5.55E-07

 

GO:0006412~translation

4.44E-05

 

GO:0051656~establishment of organelle localization

5.55E-04

 

GO:0006376~mRNA splice site selection

1.24E-03

 

GO:0016265~death

5.38E-03

8 v M

(21)

GO:0044238~primary metabolic process

6.11E-25

 

GO:0044237~cellular metabolic process

2.20E-24

 

GO:0043170~macromolecule metabolic process

4.54E-19

 

GO:0016043~cellular component organization and biogenesis

3.52E-10

 

GO:0006412~translation

5.04E-08

 

GO:0006396~RNA processing

1.20E-06

 

GO:0051236~establishment of RNA localization

2.12E-06

 

GO:0007049~cell cycle

4.24E-06

 

GO:0009058~biosynthetic process

7.48E-06

 

GO:0009719~response to endogenous stimulus

7.65E-06

 

GO:0022402~cell cycle process

1.01E-05

 

GO:0033036~macromolecule localization

1.21E-05

 

GO:0045184~establishment of protein localization

6.87E-05

 

GO:0009056~catabolic process

7.37E-04

 

GO:0007059~chromosome segregation

7.54E-04

 

GO:0051301~cell division

1.01E-03

 

GO:0051649~establishment of cellular localization

3.81E-03

 

GO:0019222~regulation of metabolic process

3.92E-03

 

GO:0019748~secondary metabolic process

3.97E-03

 

GO:0051641~cellular localization

4.23E-03

 

GO:0050794~regulation of cellular process

5.35E-03

M v B

(21)

GO:0044238~primary metabolic process

6.38E-14

 

GO:0044237~cellular metabolic process

1.65E-13

 

GO:0043170~macromolecule metabolic process

5.25E-09

 

GO:0016043~cellular component organization and biogenesis

6.25E-08

 

GO:0033036~macromolecule localization

2.08E-07

 

GO:0050794~regulation of cellular process

7.93E-07

 

GO:0045184~establishment of protein localization

4.81E-06

 

GO:0050789~regulation of biological process

6.99E-06

 

GO:0051641~cellular localization

3.08E-05

 

GO:0051649~establishment of cellular localization

6.51E-05

 

GO:0010468~regulation of gene expression

1.68E-04

 

GO:0019222~regulation of metabolic process

2.30E-04

 

GO:0016265~death

4.69E-04

 

GO:0006396~RNA processing

5.29E-04

 

GO:0007049~cell cycle

6.10E-04

 

GO:0006350~transcription

1.46E-03

 

GO:0022402~cell cycle process

1.71E-03

 

GO:0051301~cell division

5.49E-03

 

GO:0009058~biosynthetic process

5.64E-03

 

GO:0048468~cell development

6.89E-03

 

GO:0009056~catabolic process

9.26E-03

  1. Classification of GO of Biological Process was done with DAVID using the genes identified over-represented between each adjacent stage for human. P value less than 0.01 was identified as significant. The number in the bracket represents the count of significant GO terms.