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Table 1 CD46 primers used for RT-PCR, 5'-RACE and 3'-RACE reactions where amplicons were subsequently sequenced.

From: Absence of spermatozoal CD46 protein expression and associated rapid acrosome reaction rate in striped field mice (Apodemus agrarius)

 

Primer sequences

Primer descriptions

Species of origin

RT-PCR

CCTTCTGTTTCTGCTGTCT

CD46 exon 1, sense

Mm, As

 

AATCATACATGGGTCCCTA

CD46 exon 2, sense

Mm, As

 

TAGGGACCCATGTATGATT

CD46 exon 2, anti-sense

Mm, As

 

ACTACATAGATGGCAG

CD46 exon 3, sense

Mm, As

 

CTGCCATCTATGTAGT

CD46 exon 3, anti-sense

Mm, As

 

ATTGTTTACCACCTCCA

CD46 exon 5, sense

Mm, As

 

TGGAACACACACCTTTAC

CD46 exon 5, sense

As

 

CGATCAAAGCAACAATC

CD46 exon 9, anti-sense

As

 

TTCATCTTGCTGCAGATAC

CD46 exon 11, anti-sense

Mm, As

3'-RACE

TGGAACACACACCTTTAC

Gene-specific primer 1 (GSP), CD46 exon 5

As

 

AAATGTATCTGCAGCAAG

GSP2, CD46 exon 11

Mm, As

 

GACTCGAGTCGACATCGA

Anchor primer (AP)

-

 

GACTCGAGTCGACATCGA(T)17G

AP-polyT-G

-

5'-RACE

AATTTAGCTCGAGCACC

GSP3, CD46 exon 3

Mm

 

CTGCCATCTATGTAGT

GSP4, CD46 exon 3

Mm, As

 

TAGGGACCCATGTATGATT

GSP5, CD46 exon 2

Mm, As

 

GACTCGAGTCGACATCGA

AP

-

 

GACTCGAGTCGACATCGA(G)17

AP-polyG

-

  1. Key: Mus musculus musculus (Mm); Apodemus sylvaticus (As).