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Table 1 Oligonucleotide primers used for the RT-PCR analysis

From: Bovine trophoblastic cell differentiation and binucleation involves enhanced endogenous retrovirus element expression

Gene names

Accession No.

Primers

Product

GAPDH

NM_001034034.1

Forward

CCTTCATTGACCTTCACTACATGGTCTA

173 - 200

Reverse

GCTGTAGCCAAATTCATTGTCGTACCA

1029 - 1003

bCSH1

NM_181007.2

Forward

CCATCTCCCCATCAGCAGCAGT

105 - 126

  

Reverse

GAGACCCATTACACCCAAACAT

975 - 954

bPRP-1

NM_174159.2

Forward

CACGGTCAACAGGAGTCCTCACC

43 - 65

Reverse

AATTTCAGGTAGCCCGCTGTGG

873 - 852

bPAG1

NM_174411.2

Forward

CACCATTGGAACACCCCC

245 - 262

Reverse

CACTGGGTAGTTGATGCCGTT

989 - 969

IFNT

NM_001015511.2

Forward

TCCCCATGGCCTTCGTGCTCTCTCT

75 - 99

Reverse

CTCAAAGTGAGTTCAGATCTCCACC

668 - 644

bERVE-A

NW_001493691.1

Forward

TTCCTCAAAGAAGAAGAGGTAGAACAA

703277-703304

Reverse

GGGTCCAAATAAGAGGAATAGAATGAT

703748-703775

bERVE-B

NW_001493674.2

Forward

GAACTTAATGAGGATATGGAGCAGGTA

3100208-3100181

Reverse

GACGTTTTGGGTAATCTTTAGTTGAGA

3099456-3099429

BERV-K1 env

NW_001495384.1

Forward

GGATGCAATTTGGATCCCAGAC

218834-218855

Reverse

CCTTTGCATATTAGGCCTCTCCG

221044-221022

BERV-K2 env

NW_001494209.3

Forward

TCCACAGGACGCAGATTCTCC

1926147-1926167

  

Reverse

CCTTTGCGTATGCCGAGCCTCCT

1928389-1928367