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Table 2 Reciprocal chromosomal arm gain-loss complementary pairs in SCM, TE, and WB: Aneuploid-complementary

From: Validation of preimplantation genetic tests for aneuploidy (PGT-A) with DNA from spent culture media (SCM): concordance assessment and implication

Embryo
ID
Samples NGS results Subchromosomal arm/mosaic GC%
5 SEC + 3p(pter→p25.3,~ 11 M, ×3) ±3p 39.67
TE -3p(pter→p25.3,~ 11 M, × 1)
WB -3p(pter→p24.3,~ 19 M,× 1)
43 SEC −5(×1),-13(× 1),-14(× 1,mos*),+ 15(×3,mos*),-Xq(q13.3 → qter, ~ 81 M, × 1,mos*),... ±5mos 39.51
TE + 5(× 3,mos*),+ 14(p11.1 → q32.13,~ 78 M,× 3,mos*)
WB + 5(×3,mos*,~ 30%)
46 SEC (q24.3 → qter,~ 24 M,×1),+13q(q21.33 → qter,~ 43 M,× 3, mos*) ±13q mos 38.55
TE -6q(q24.2 → qter,~ 26 M,×1,mos*),-7q(q21.11 → qter,~ 81 M,× 1,mos*), −13(pter→q31.1,~ 61 M,× 1,mos*),-21 (× 1,mos*)
WB -6q(q25.2 → qter,~ 17 M,× 1),+13q(q21.33 → qter,~ 44 M,× 3)
49 SEC + 4(pter→q22.1,~ 90 M,× 3,mos*),-11q(q13.4 → qter,~ 64 M, × 1,mos*),-13(q21.31 → qter,~ 52 M,× 1,mos*),+ 19(× 3) ±13q- mos 38.55
TE + 3(× 3,mos*),+9q(q33.1 → qter,~ 22 M,× 3,mos*),+13q(q31.1 → qter,~ 33 M,× 3,mos*),+ 15(× 3,mos*),+ 19(× 3), …
WB + 19(× 3)
58 SEC + 2(p16.1 → q22.1,~ 80 M,× 3),-3(p11.1 → qter,~ 110 M,× 1),+ 6(p21.1 → qter,~ 125 M,× 3),+ 7(pter→q11.23,~ 75 M,× 3),8(p23.1 → q24.23,~ 128 M,× 1), … ±3p 39.67
TE + 3(p12.3 → qter,~ 122 M,× 3)
WB + 3(p12.3 → qter,~ 122 M,× 3)
73 SEC + 2(× 3),+ 4(× 3),+ 6(p22.3 → qter,~ 147 M,× 3),+ 7(× 3),+ 8(× 3),... ±6p 39.61
TE -6p(pter→p22.3,~ 16 M,× 1),+10p(pter→p15.1,~ 8 M, × 3)
WB -6p(pter→p22.3,~ 16 M,× 1),+10p(pter→p15.1,~ 8 M,× 3)