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Table 2 The SNPs that were genotyped for this study

From: Associations between the maternal circulating lipid profile in pregnancy and fetal imprinted gene alleles: a cohort study

Gene

No. of SNPs

Single nucleotide polymorphisms

DLK1

5

rs12147008, rs7155375, rs10139403, rs1802710, rs7147586

FAM99A*

7

rs4752779, rs4752781, rs11600502, rs10839220, rs11607954, rs1489945, rs7131362

GNAS

20

rs6123832, rs965808, rs6128441, rs6026561, rs6026560, rs12625436, rs4810148, rs7271854, rs6100260, rs6026576, rs6128461, rs6123837, rs13831, rs234630, rs919196, rs3730168, rs919197, rs7121, rs234623, rs234621

GRB10

17

rs4245555, rs12669770, rs7802879, rs7777754, rs2715129, rs3807549, rs2299150, rs11769934, rs2237441, rs1468450, rs6948959, rs980716, rs2715116, rs737292, rs7794604, rs17133917, rs2237450

H19

13

rs2071094, rs2735466, rs7950932, rs217222, rs217727, rs2251375, rs217228, rs3741216, rs1706879, rs2735971, rs7950715, rs7950787, rs12417375

IGF2*

17

rs6578987, *rs734351, *rs4341514, rs680, *rs3741212, *rs11603378, *rs3213216, *rs10770125, *rs3741205, *rs3741206, rs1004446, *rs4320932, *rs3842752, *rs7924316, *rs7483056, *rs6356, *rs10743152

INS*

16

*rs734351, *rs4341514, rs2585, *rs3741212, *rs11603378, *rs3213216, *rs10770125, *rs3741205, *rs3741206, *rs4320932, rs3741211, *rs3842752, *rs7924316, *rs7483056, *rs6356, *rs10743152

KCNQ1OT1*

14

rs231352, rs463924, rs4930005, rs231841, rs10832514, rs756852, rs7128926, rs10832430, rs231361, rs760419, rs9666537, rs7929804, rs10766218, rs6578283

MEST

6

rs12706933, rs13234660, rs765205, rs13225903, rs1047456, rs10954272

NNAT

3

rs6066671, rs12481150, rs6019103

PEG3*

8

rs17207579, rs11084466, *rs2079877, *rs7256072, *rs382592, rs758752, rs7248098, *rs1860565

PEG10

5

rs1568214, rs13073, rs1533831, rs6948099, rs6465422

PLAGL1

20

rs12528289, rs9484833, rs1884087, rs10499846, rs2268440, rs6930726, rs7770529, rs2268443, rs2876578, rs9373409, rs2268445, rs17073273, rs9403542, rs9484836, rs6570599, rs2328537, rs9321957, rs6937128, rs9767615, rs2207851

SGCE

2

rs1879854, rs7778237

SNRPN

12

rs7164801, rs17114774, rs7171320, rs1453556, rs4028398, rs1982981, rs736008, rs9806682, rs7164989, rs8042562, rs12592279, rs8029318

ZIM2*

8

*rs2079877, rs12981689, rs1476830, *rs7256072, *rs382592, *rs1860565, rs2286751, rs10401139

  1. Genes are named according to their HUGO (Human Genome Organisation) abbreviation
  2. *indicates that some of the SNPs are shared with another gene (IGF2 with INS, PEG3 with ZIM2, PLAGL1 with HYMAI, KCNQ1OT1 with KCNQ1, and FAM99A with FAM99B and KRTAP5-6). A total of 155 SNPs were genotyped. The following SNP genotypes failed as either the assay was unsuitable or the genotypes did not pass the quality control procedures: (GNAS) rs6123837, (GRB10) rs2237450, (PLAGL1) rs12528289, (ZIM2) rs2286751
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Reproductive Biology and Endocrinology

ISSN: 1477-7827

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