Table 2 The quality of library sequences by Solexa sequencing
From: Identification and characterization of microRNAs in the pituitary of pubescent goats
Type | Pub | Pre | ||
|---|---|---|---|---|
Counts | Percent | Counts | Percent | |
Total reads | 11,793,577 | 100% | 10,676,789 | 100% |
N% > 10% | 124 | 0.00% | 125 | 0.00% |
Low quality | 3434 | 0.03% | 2956 | 0.03% |
5′ adapter contamine | 165 | 0.00% | 93 | 0.00% |
3 adapter null or insert null | 234,299 | 1.99% | 184,344 | 1.73% |
With polyA/T/G/C | 5158 | 0.04% | 4261 | 0.04% |
Clean reads | 11,550,397 | 97.94% | 10,485,010 | 98.20% |