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Table 6 Transcription factor binding sites (TFBS) over represented in up- and down- regulated genes from CERTL

From: Bioinformatic detection of E47, E2F1 and SREBP1 transcription factors as potential regulators of genes associated to acquisition of endometrial receptivity

Up-regulated genes Down-regulated genes
Tool for TFBS analysis Transcription factor name TFBS matrix p Value Tool for TFBS analysis Transcription factor name TFBS matrix p Value
MotifScanner E47 TRANSFAC 0.008 MotifScanner E47 TRANSFAC 0.002
  MEF2 TRANSFAC 0.002   SREBP1 TRANSFAC 0.007
  SREBP1 TRANSFAC 0.007   ARNT TRANSFAC 0.001
TELIS PBX1 TRANSFAC 0.0001 TELIS ARNT TRANSFAC <0.0001
  AP1 TRANSFAC 0.0005   HNF1 TRANSFAC 0.007
  EVI1 TRANSFAC 0.002   HNF-1 JASPAR 0.007
  SOX5 TRANSFAC 0.003 OTFBS Hb TRANSFAC <0.0001
  Sox-5 JASPAR 0.0031   BR-C Z1 TRANSFAC <0.0001
  Pbx1 JASPAR 0.007   BR-C Z4 TRANSFAC 0.004
  FREAC-2 JASPAR 0.007   HFH-2 TRANSFAC <0.0001
  SOX-9 JASPAR 0.008   HFH-3 TRANSFAC <0.0001
OTFBS GCN4 TRANSFAC 0.001   FOXJ2 TRANSFAC <0.0001
  CP2 TRANSFAC 0.007 GATHER NFY TRANSFAC 0.004
  Ik-2 TRANSFAC <0.0001   E2F1 TRANSFAC 0.006
  Bcd TRANSFAC <0.0001   DEAF1 TRANSFAC 0.007
  ARP-1 TRANSFAC <0.0001     
  MEF-2 TRANSFAC 0.005     
  cap TRANSFAC 0.004     
  E47 TRANSFAC 0.002     
  SREBP-1 TRANSFAC <0.0001     
GATHER SRF TRANSFAC 0.001     
  NRF2 TRANSFAC 0.002     
  E2F1 TRANSFAC 0.002     
  FREAC2 TRANSFAC 0.003     
  HEB TRANSFAC 0.004     
  ELK1 TRANSFAC 0.005     
  1. Transcription factors predicted by more than one analysis tool appear in bolded style.
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Reproductive Biology and Endocrinology

ISSN: 1477-7827

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