Skip to main content

Table 5 The over-represented classification of pathways for human identified genes

From: A comparative genome analysis of gene expression reveals different regulatory mechanisms between mouse and human embryo pre-implantation development

 

pathways

p value

1 v 2

(0)

none

none

2 v 4

(3)

hsa04540:Gap junction

2.29E-03

 

hsa00100:Biosynthesis of steroids

2.84E-03

 

hsa05060:Prion disease

4.75E-03

4 v 8

(8)

hsa04110:Cell cycle

3.37E-09

 

hsa04120:Ubiquitin mediated proteolysis

1.44E-07

 

hsa04520:Adherens junction

5.58E-06

 

hsa04115:p53 signaling pathway

2.87E-04

 

hsa03022:Basal transcription factors

8.31E-04

 

hsa00230:Purine metabolism

4.87E-03

 

hsa05215:Prostate cancer

4.99E-03

 

hsa00970:Aminoacyl-tRNA biosynthesis

8.41E-03

8 v M

(6)

hsa04120:Ubiquitin mediated proteolysis

9.93E-05

 

hsa04110:Cell cycle

1.58E-04

 

hsa05131: Eenteropathogenic E. coli (EPEC) infection

3.82E-03

 

hsa05130: Enterohemorrhagic E. coli (EHEC) infection

3.82E-03

 

hsa04115:p53 signaling pathway

3.93E-03

 

hsa05221:Acute myeloid leukemia

7.63E-03

M v B

(11)

hsa00100:Biosynthesis of steroids

2.26E-06

 

hsa05131: Eenteropathogenic E. coli (EPEC) infection

5.82E-05

 

hsa05130: Enterohemorrhagic E. coli (EHEC) infection

5.82E-05

 

hsa04120:Ubiquitin mediated proteolysis

1.78E-04

 

hsa00251:Glutamate metabolism

3.03E-04

 

hsa04520:Adherens junction

7.05E-04

 

hsa00071:Fatty acid metabolism

2.75E-03

 

hsa05110:Cholera - Infection

2.93E-03

 

hsa00280:Valine, leucine and isoleucine degradation

6.04E-03

 

hsa05211:Renal cell carcinoma

6.26E-03

 

hsa00900:Terpenoid biosynthesis

7.14E-03

  1. Classification of related pathways was done with DAVID using the genes identified over-represented between each adjacent stage for human. P value less than 0.01 was identified as significant. The number in the bracket represents the count of significant pathways.