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Table 1 Characteristics of datasets included in the studies.

From: A cross-study gene set enrichment analysis identifies critical pathways in endometriosis

First Author

or Contributor

Chip

GEO Accession

Experimental design

Classification

Probes

Number of samples

      

Disease

Normal

Sha [4]

U133 PLUS 2.0

GSE7846

unpaired, HEECS

ovarian

54K

5

5

Burney [14]

U133 PLUS 2.0

GSE6364

unpaired, tissues

Ovarian, peritoneal,

rectovaginal

54K

21

16

Eyster [15]

CodeLink

GSE5108

paired, tissues

Ovarian, peritoneal

55K

6/5

6/5

Hever [16]

U133 PLUS 2.0

GSE7305

paired, tissues

ovarian

54K

10

10

Roth

U133 PLUS 2.0

GSE7307

unpaired, tissues

ovarian

54K

18

23

Hull [17]

U133A

GSE11691

paired, tissues

peritoneal

22K

9

9

  1. paried: compare eutopic endometrium to ectopic endometrium from the same patients with entire endometrial tissue.
  2. unparied: compare eutopic endometrium from women with endometriosis to eutopic endometrium from women without endometriosis.
  3. HEECS: human endometrial endothelial cells samples.