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Table 2 Selected salmon ovarian genes revealed by SSH and further assessed with qPCR.
| Putative gene identity | EST | Size of query (bp) | E-value | Species | Accession no. | GO molecular function term(s) |
|---|---|---|---|---|---|---|
| Factor in the germline alpha (figla) | EX152185 | 257 | 9E-14 | K. marmoratus | ABG89136 | GO:0030528 transcription regulator activity |
| Zona pellucida glycoprotein C (zpc) | EX152517 | 277 | 8E-09 | D. rerio | AAI16532 | |
| Zona pellucida protein X (zpx) | EX152510 | 429 | 9E-27 | S. aurata | AAY21008 | |
| Egg envelope glycoprotein (eeg) | EX152158 | 592 | 6E-34 | D. rerio | XP_001335392 | |
| Somatic lipoprotein receptor (vldlro) | EX152595 | 546 | 8E-14 | O. mykiss | CAA05874 | GO:0004872 receptor activity |
| GO:0005509 calcium ion binding | ||||||
| Cathepsin B, a (ctsba) | EX152225 | 495 | 4E-29 | D. rerio | NP_998501 | GO:0004197 cysteine-type endopeptidase activity |
| Cathepsin D (ctsd) | EX152680 | 327 | 1E-123 * | O. mykiss | U90321 | GO:0004190 aspartic-type endopeptidase activity |
| GO:0004192 cathepsin D activity | ||||||
| GO:0004194 pepsin A activity | ||||||
| GO:0016787 hydrolase activity | ||||||
| Cathepsin Z (ctsz)† | EX152609 | 624 | 5E-172 * | O. mykiss | AAT94061 | GO:0004197 cysteine-type endopeptidase activity |
| GO:0008234 cysteine-type peptidase activity | ||||||
| Serum lectin isoform 2 (lcal) | EX152541 | 513 | 1E-34 | S. salar | AAO43606 | GO:0005529 sugar binding |
| Rhamnose binding lectin STL3 (lrham) | EX152294 | 324 | 8E-52 | O. mykiss | BAA92257 | GO:0005529 sugar binding |
| GO:0016524 latrotoxin receptor activity | ||||||
| Alveolin (alv) | EX152194 | 532 | 4E-36 | O. latipes | BAA90750 | GO:0008237 metallopeptidase activity |
| GO:0008533 astacin activity | ||||||
| Cyclin E (ccne) | EX152152 | 800 | 3E-53 | D. rerio | NP_571070 | GO:0016301 kinase activity |
| Ferritin H-3 (fth3) | EX152267 | 552 | 2E-91 | O. mykiss | BAA13148 | GO:0005488 binding |
| GO:0005506 iron ion binding | ||||||
| GO:0008199 ferric iron binding | ||||||
| GO:0016491 oxidoreductase activity | ||||||
| GO:0046872 metal ion binding | ||||||
| GO:0046914 transition metal ion binding | ||||||
| DnaJ subfamily A member 2 (dnaja2) | EX152440 | 334 | 2E-55 | D. rerio | NP_998658 | GO:0031072 heat shock protein binding |
| GO:0051082 unfolded protein binding | ||||||
| Coatomer protein epsilon subunit (cope)†† | EX152380 | 438 | 6E-44 | O. mykiss | AAM18476 | |
| Anterior pharynx defective 1b (aph1b) | EX152190 | 601 | 6E-90 | D. rerio | NP_956409 | GO:0005515 protein binding |
| Retinol dehydrogenase 1 (rdh1) | EX152534 | 565 | 7E-71 | O. latipes | ABQ09278 | GO:0016491 oxidoreductase activity |
