Skip to main content

Table 3 The representative genes which were distributed to each cluster

From: Global gene expression analysis and regulation of the principal genes expressed in bovine placenta in relation to the transcription factor AP-2 family

Accession No.

Gene Name

Cluster 1

 

NM_175797

ARHGDIB: Rho GDP dissociation inhibitor beta

NM_174506

BCKDHA: branched chain alpha-keto acid dehydrogenase

NM_001034046

COX5B: Cytochrome c oxidase subunit Vb

NM_173906

DCN: Decorin

NM_001040498

JSP.1: MHC Class I JSP.1

NM_001015556

RPL18: Ribosomal protein L18

NM_001015531

RPS5: Ribosomal protein S5

NM_174464

SPARC: secreted protein, acidic, cysteine-rich

NM_001002885

TMSB4X: Thymosin beta 4, X chromosome

NM_174491

YWHAE: 14-3-3 epsilon

Cluster 2

 

NM_181007

CSH1: Placental lactogen

AB098803

LOC404051: Similar to thrombin inhibitor

AB098909

SERPINB6: Serpin peptidase inhibitor clade B member 6

NM_174411

PAG1: Pregnancy-associated glycoprotein 1

NM_176616

PAG5: Pregnancy-associated glycoprotein 5

NM_176618

PAG7: Pregnancy-associated glycoprotein 7

NM_174159

PRP1: Prolactin-related protein 1

M27239

PRP2/4: Prolactin-related protein 2/4

NM_177488

SULT1E1: Sulfotransferase family 1E estrogen-preferring member 1

NM_174623

TMSB10: Thymosin, beta 10

Cluster 3

 

NM_173979.3

ACTB: Actin, beta

NM_181018

CLCA3: Chloride channel, calcium activated, family member 3

NM_174333

GRP58: Glucose regulated protein 58 kD

M83104

LOC515773: Cytochrome b-5 reductase

XM_870635

FTH1: Ferritin heavy polypeptide 1

NM_001038163

MGC133894: Similar to Tubulin alpha-3 chain

NM_174600

SLC1A3: Solute carrier family 1

NM_001010995

TPM2: Tropomyosin 2

M62428

UBC: Polyubiquitin

NM_174217

VIL2: Villin 2

Cluster 4

 

NM_001012519

AKR1B1: Aldose reductase

NM_174800

CFDP2: craniofacial development protein 2

AF013213

EEF1A1: Eukaryotic translation elongation factor 1 alpha 1

NM_174550

HSPA1A: Heat shock 70 kD protein 1

NM_174345

HSPA8: Heat shock 70 kDa protein 8

NM_001025569

HSPB1: Heat shock 27 kDa protein 1

NM_174087

IGF2: Insulin-like growth factor 2

NM_174378

LALBA: Lactalbumin, alpha

XM_583697

LOC507139: Similar to grancalcin

NM_180999

LYZ: Lysozyme

Cluster 5

 

NM_181003

AQP4: Aquaporin 4

NM_174257

CALB3: Calbindin 3

AB099882

COL12A1: Collagen, type XII, alpha 1

NM_001034039

COL1A1: Collagen, type I, alpha 1

NM_174770

GPX4: Glutathione peroxidase 4

NM_001033610

KRT8: Keratin 8

XM_588040

LOC510833: Similar to Collagen alpha 1(III)

NM_174459

SEPP1: Selenoprotein P-like protein precursor

NM_174472

TIMP2: Tissue inhibitor of mettaloproteinase 2

AF241780

TKDP5: Trophoblast Kunitz domain protein 5

Cluster 6

 

NM_001046249

CALM1: Calmodulin 1

NM_001038220

CORO2A: Coronin, actin binding protein, 2A

K00800

FN1: Fibronectin 1

NM_174076

GPX1: Glutathione peroxidase 1

NM_174343

HSD3B: HSD3B protein

NM_174556

IGFBP3: Insulin-like growth factor binding protein 3

XM_614707

LOC534812: Similar to Heat shock protein HSP 90-alpha

NM_001033608

MIF: Macrophage migration inhibitory factor

NM_001015592

PFN1: Profilin 1

NM_174471

TIMP1: Tissue inhibitor of metalloproteinase 1

Cluster 7

 

NM_174716

ANXA2: Annexin A2

NM_001045935

CTDSP2: CTD small phosphatase 2

NM_174642

HSD11B2: Hydroxysteroid (11-beta) dehydrogenase 2

XM_612863

LOC533452: Similar to Alpha-1 catenin

NM_174798

MSX1: Msh homeo box 1

NM_174115

MUC1: Mucin 1

NM_205775

TKDP4: Trophoblast Kunitz domain protein 4

BE477825

VCL: Vinculin

NM_174216

VEGF: Vascular endothelial growth factor

NM_174487

VEGFB: Vascular endothelial growth factor B

Cluster 8

 

NM_173902

CLU: Clusterin

NM_174520

COL1A2: Collagen, type I, alpha 2

NM_174029

CST3: Cystatin C

NM_174031

CTSB: Cathepsin B

NM_176612

HMGB1: High-mobility group box 1

NM_174092

IL1A: Interleukin 1, alpha

XM_598260

LAMB1: Laminin, beta 1

NM_174707

MGP: Matrix Gla protein

NM_174030

CTGF: Connective tissue growth factor

NM_174797

UMP: Uterine milk protein

Cluster 9

 

NM_175784

ANXA1: Annexin I

AF515786

B4GALT1: Glycoprotein-4-beta-galactosyltransferase 2

NM_174032

CTSL: Cathepsin L

NM_176608

GHR: Growth hormone receptor

NM_178319

GRP: Gastrin-releasing peptide

NM_174125

NPPC: Natriuretic peptide precursor C

NM_176621

PAG10: Pregnancy-associated glycoprotein 10

NM_176619

PAG8: Pregnancy-associated glycoprotein 8

NM_174182

SELL: Selectin L

NM_176669

STC1: Stanniocalcin 1

Cluster 10

 

BC109863

APOD: Apolipoprotein D

NM_176648

CAPZB: Capping protein (actin filament) muscle Z-line, beta

NM_176644

CYP11A1: Cytochrome P450, family 11, subfamily A, polypeptide 1

NM_174363

INHBA: Inhibin, beta A

NM_174100

LDHB: Lactate dehydrogenase B

NM_001034053

LMNA: Lamin A

XM_615304

LOC541253: Similar to Limbic system-associated membrane protein

NM_174745

MMP2: Matrix metalloproteinase 2

NM_174409

OSTF1: Osteoclast stimulating factor 1

BC102667

S100A11: S100 calcium binding protein A11