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Table 1 Differentially expressed genes in the ovary of lipopolysaccharide (LPS)-treated female trout.

From: Bacterial lipopolysaccharide induces apoptosis in the trout ovary

Time (hours p.i.)

24

72

Gene name

Up-regulated genes

1,57**

-1,16

Death-associated protein kinase 3 (ZIP-kinase).

1,32*

1,42

HLA class II histocompatibility antigen, gamma chain

1,56*

1,30

HLA class I histocompatibility antigen

1,25**

1,04

Myosin heavy chain, skeletal muscle, adult 1

1,33*

-1,15

Synapse associated protein 1

-1,07

1,56*

Collagen, type I, alpha 1chain

1,06

1,49*

Collagen, type I, alpha 2 chain

-1,05

1,39*

Phospholipase D family, member 4

1,05

1,56*

Microtubule-associated protein RP/EB

-1,14

1,28*

Translocon-associated protein, delta subunit precursor

Down-regulated genes

-1,38*

1,09

Cdk inhibitor p21 binding protein

-1,35*

-1,23

Cytochrome oxidase subunit III-2

-1,39*

-1,15

Cytochrome oxidase subunit III-3

-1,49*

-1,12

Oxidoreductase UCPA

-1,22*

-1,02

Hypoxanthine-guanine phosphoribosyltransferase

-1,05

-1,32*

Beclin 1

1,23

-1,21*

Apoptosis inhibitor 5

1,04

-1,48*

Cytochrome P450 2J2

-1,01

-1,35*

Serum/glucocorticoid-regulated kinase

-1,14

-1,26**

Lactoferrin

-1,20

-1,49*

Alanine-glyoxylate aminotransferase

-1,07

-1,65*

Allograft inflammatory factor-1

-1,10

-1,31*

NADH dehydrogenase subunit 5–2

-1,06

-1,34*

Acyl-CoA dehydrogenase 9, mitochondrial

-1,05

-1,25*

High affinity immunoglobulin epsilon receptor alpha

-1,05

-1,24*

Troponin I, slow skeletal muscle

-1,18

-1,79*

Beta enolase

-1,05

-1,77*

Telomerase reverse transcriptase

-1,03

-1,23*

Coatomer epsilon subunit (Epsilon-COP).

  1. The expression ratio (normalized log intensity ratio) data at 24 and 72 hours post-injection (p.i.) are shown. Significant differences between control and LPS-injected fish, as analyzed by Student's t-test, are indicated by asterisks (* p < 0.05; ** p < 0.01)