Table 2 Characterization of ARBSs associated with androgen regulated epididymal beta-defensins
From: Androgenic regulation of beta-defensins in the mouse epididymis
Gene name | Chr | ARBS distance to TSS | ARBS location | Fold enrichment | Potential ARE? | Potential ARE distance to TSS | Potential ARE sequence |
|---|---|---|---|---|---|---|---|
Spag11a | chr8 | −1914 | upstream | 113.6 | Yes | −1844 | CGGCAACTTTCTGTACTTT |
|  |  |  |  |  |  | −1822 | GAAGGACAGAAAGTCCTGT |
|  |  |  |  |  |  | −1740 | GATGGACACTTTGTCCTCT |
Defb15 | chr8 | 2842 | downstream | 49.3 | Yes | 2726 | TCAGCACTTACTGTTCCTG |
Defb18 | chr1 | −6911 | upstream | 36.9 | Yes | −7011 | GAATCTTTTTATGTTCTCT |
|  |  |  |  |  |  | −7020 | TATGTTCTCTATGTTCTGT |
Defb19 | chr2 | −5979 | upstream | 32.9 | Yes | −6075 | ATCGATCGCTGTGTTCCCA |
|  |  |  |  |  |  | −6106 | TGGGAGCCACTTGTTCCTT |
|  | chr2 | −3900 | upstream | 27.2 | Yes | −3970 | ATGCTATAGTTTGTTCTCA |
|  |  |  |  |  |  | −4012 | TAGGAACAGCTTGGCCTGA |
Defb20 | chr2 | −698 | upstream | 48.3 | No |  |  |
Defb30 | chr14 | −4251 | upstream | 33.2 | No |  |  |
Defb34 | chr8 | −222 | upstream | 21.3 | Yes | −110 | ATGGGGTGATTTGTTCTGA |
Defb37 | chr8 | 1659 | intron | 19.0 | Yes | 1609 | AGGGAAAGCTGTGTTCTTG |
| Â | Â | Â | Â | Â | Â | 1555 | GATCAAAGCCTTGTTCTTT |
| Â | Â | Â | Â | Â | Â | 1531 | CAAGGACACTGTGTGCTGA |
Defb39 | chr8 | 1750 | intron | 40.9 | Yes | 1647 | TGGGCACACAGTGGCCTTG |
Defb41 | chr1 | −7576 | upstream | 63.6 | Yes | −7633 | CAAGAACACTCTGTGATAT |
|  |  |  |  |  |  | −7692 | CCAGAACAACATGTAACAT |
Defb42 | chr14 | −4893 | upstream | 33.2 | No |  |  |
Defb22 | chr2 | −9848 | upstream | 60.5 | Yes | −9895 | ACAGCATGCTGTGTTCTTC |
|  |  |  |  |  |  | −9958 | TTAGAACAACACGATCTCA |