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Table 3 Putative identity, size and homology of porcine conceptus cDNA clones from tubular to filamentous subtraction.

From: Analysis and characterization of differential gene expression during rapid trophoblastic elongation in the pig using suppression subtractive hybridization

Expression Pattern Identity Clone Number Base Pairs submitted to BLAST GenBank Accession Number Homology
Down-Regulated      
  16S Ribosomal RNA OSU-T2-19* 242 AY011178 Pig 100% (182/182)
  Myeloid Cell Leukemia OSU-T2-40* 636 AF144096 Rat 96% (227/236)
  (Bcl-2Related Protein)    AJ307006 Pig 93% (151/163)
     BC005427 Mouse 91% (465/510)
     NM_021960 Human 88% (175/199)
Up-Regulated      
  Pro-interleukin-1β OSU-F-1* 723 X74568 Pig 97% (319/328)
  Interleukin-1β OSU-F-2* 684 M86725 Pig 90% (623/686)
     AB028216 Dolphin 87% (427/492)
     M37211 Cow 84% (448/531)
     X54796 Sheep 83% (418/501)
     U92481 Horse 85% (298/349)
     NM_000576 Human 85% (280/329)
  S-adenosylhomocyteine hydrolase OSU-F-3* 452 AJ422131 Pig 99% (355/356)
     BC010018 Human 88% (238/272)
     NM_016661 Mouse 83% (66/79)
  Heat Shock Cognate Protein 70kD OSU-F-7* 650 AF352832 Human 91% (501/546)
     X53335 Cow 92% (482/522)
     NM_024351 Rat 90% (493/546)
     M19141 Mouse 89% (479/534)
  Ribosomal protein 8S OSU-F-21 442 NM_031706 Rat 92% (260/281)
     NM_001012 Human 92 % (260/281)
     NM_009098 Mouse 91% (263/289)
  Metallopanstimulin-1 OSU-F-30 382 L19739 Human 94% (244/259)
  Elfin OSU-F-54* 540 NM_020992 Human 85% (321/379)
  (PDZ and LIM domain 1)     
  1. * Indicates transcripts with multiple clones sequenced