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Table 2 Putative identity, size and homology of porcine conceptus cDNA clones from spherical to tubular subtraction.

From: Analysis and characterization of differential gene expression during rapid trophoblastic elongation in the pig using suppression subtractive hybridization

Expression Pattern Identity Clone Number Base Pairs submitted to BLAST GenBank Accession Number Homology
Down-Regulated      
  F1Fo-ATP synthase complex OSU-S-6 313 S70448 Bovine 93% (205/220)
     NM_006476 Human 93% (204/219)
     BC031384 Mouse 92% (128/139)
  Similar to keratin 18 OSU-S-14* 324 BC009754 Human 87% (134/154)
  Thymosin Beta 4 OSU-S-7* 308 BC022857 Human 91% (158/173)
     X16053 Mouse 84% (140/167)
     NM_031136 Rat 85% (122/143)
  16S Ribosomal RNA OSU-S-31 427 AY011178 Pig 99% (374/375)
  Mitochondrial Cytochrome B OSU-S-54 241 AJ314556 Pig 98% (182/185)
  Complete Mitochondrial DNA OSU-S-11* 679 AF304203 Pig 99% (678/679)
Up-Regulated      
  28S Ribosomal RNA OSU-T1-3* 436 X00525 Mouse 100% (350/350)
     M11167 Human 100% (350/350)
  16S Ribosomal RNA OSU-T1-7* 250 AY011178 Pig 99% (212/214)
  18S Ribosomal RNA OSU-T1-8* 342 AF102857 Pig 99% (293/294)
     X00686 Mouse 99% (293/294)
     X03205 Human 99% (293/294)
  Unknown OSU-T1-50 702 AC009682 Human 87% (179/206)
  1. * Indicates transcripts with multiple clones sequenced